DNA Methylation by Reduced Representation Bisulfite Seq from ENCODE/HudsonAlpha
This data was generated by ENCODE. If you have questions about the data, contact the submitting laboratory directly (Florencia Pauli mailto:«email»). If you have questions about the Genome Browser track associated with this data, contact ENCODE (mailto:«email»). This track is produced as part of the ENCODE project. The track reports the percentage of DNA molecules that exhibit cytosine methylation at specific CpG dinucleotides. In general, DNA methylation within a gene's promoter is associated...
Provenance — who produced it, who reused it
Linked to 8 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- Widespread plasticity in CTCF occupancy linked to DNA methylatio... 2012 · 635 cites
- Mechanisms and Disease Associations of Haplotype-Dependent Allel... 2016 · 140 cites
- Differential DNA methylation of vocal and facial anatomy genes i... 2020 · 133 cites
- Archaic adaptive introgression in <i>TBX15/WARS2</i> 2016 · 119 cites
- Melissa: Bayesian clustering and imputation of single-cell methy... 2019 · 73 cites
3 further papers cite this accession but reuse could not be confirmed.
Deep data QC
insufficient data to scoreStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
The insufficient grade is a transparent weighted average. Each metric below scored from 0–100% against the published methylation thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0