A draft map of cis-regulatory sequences in the mouse genome
The laboratory mouse is the most widely used mammalian model organism in biomedical research. The 2.6 billion bases of the mouse genome share a high degree of conservation with the human genome, so a thorough annotation of the mouse genome will be of significant value to understanding the function of the human genome. To date, most of the functional sequences in the mouse genome have yet to be found, and the cis-regulatory sequences in particular are still poorly annotated. Comparative genomics...
Provenance — who produced it, who reused it
Linked to 34 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- Single-cell multi-omics sequencing of mouse early embryos and em... 2017 · 393 cites
- Identification of GPC2 as an Oncoprotein and Candidate Immunothe... 2017 · 228 cites
- Integrative single-cell analysis of transcriptome, DNA methylome... 2018 · 181 cites
- Identification of hierarchical chromatin domains 2015 · 180 cites
- Integrated transcriptome analysis of mouse spermatogenesis 2014 · 156 cites
- Recapitulation and Reversal of Schizophrenia-Related Phenotypes... 2019 · 141 cites
- Effect of high fat diet on paternal sperm histone distribution a... 2015 · 135 cites
- Gene length and expression level shape genomic novelties 2014 · 111 cites
- Sperm histone H3 lysine 4 tri-methylation serves as a metabolic... 2022 · 102 cites
- Intragenic Enhancers Attenuate Host Gene Expression 2017 · 100 cites
- High-resolution mapping of transcriptional dynamics across tissu... 2014 · 98 cites
- Nucleoporin 153 links nuclear pore complex to chromatin architec... 2020 · 94 cites
- Spatial Genome Re-organization between Fetal and Adult Hematopoi... 2019 · 89 cites
- A rare codon-based translational program of cell proliferation 2020 · 78 cites
- Super-enhancer switching drives a burst in gene expression at th... 2020 · 77 cites
- ZFP57 maintains the parent-of-origin-specific expression of the... 2016 · 76 cites
17 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently
Scientific quality
Based on hands-on reproduction of the papers that use this dataset. A reproducible paper that stands on this data is positive evidence; a flagged one is a prompt to look closer — never a verdict on the dataset itself without the evidence.