A draft map of cis-regulatory sequences in the mouse genome [ChIP-Seq]
As the most widely used mammalian model organism, mice play a critical role in biomedical research for mechanistic study of human development and diseases. Today, functional sequences in the mouse genome are still poorly annotated a decade after its initial sequencing. We report here a map of nearly 300,000 cis-regulatory sequences in the mouse genome, representing active promoters, enhancers and CTCF binding sites in a diverse set of 19 tissues and cell types. This map provides functional anno...
Provenance — who produced it, who reused it
Linked to 11 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- Insulator function and topological domain border strength scale... 2014 · 313 cites
- CRISPR Reveals a Distal Super-Enhancer Required for Sox2 Express... 2014 · 221 cites
- DNA methylation regulates discrimination of enhancers from promo... 2017 · 142 cites
- Attenuated chromatin compartmentalization in meiosis and its mat... 2019 · 141 cites
- Integrative epigenomic analysis reveals unique epigenetic signat... 2016 · 80 cites
6 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently