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GSE29272

GEO first seen 2016

Affymetrix gene expression array data for cardia and non-cardia gastric cancer samples

Organism

Homo sapiens

Samples

268

Type

Expression profiling by arra...

Submitted

2011-05-12

We identified different and common dysregulated genes in cardia and non-cardia gastric cancer in the two type of gastric cancer

Provenance — who produced it, who reused it

Linked to 100 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by

Gangshi WangNan HuHoward H YangMaxwell P LeePhilip R Taylor

Reused by

CD36 mediates palmitate acid-induced metastasis of gastric cance... 2019 · 222 cites
SERPINH1 regulates EMT and gastric cancer metastasis via the Wnt... 2020 · 205 cites
Identification of Potential Key Genes Associated With the Pathog... 2018 · 188 cites
Stearoyl-CoA desaturase 1 (SCD1) facilitates the growth and anti... 2020 · 148 cites
McTwo: a two-step feature selection algorithm based on maximal i... 2016 · 115 cites
Lysyl oxidase promotes liver metastasis of gastric cancer via fa... 2019 · 114 cites
<i>Helicobacter pylori</i> ‐induced miR‐135b‐5p promotes cisplat... 2018 · 109 cites
Estrogen-related receptor gamma functions as a tumor suppressor... 2018 · 106 cites
BET protein inhibitor JQ1 downregulates chromatin accessibility... 2020 · 103 cites
YTHDF1 promotes breast cancer progression by facilitating FOXM1... 2022 · 100 cites
TEAD1/4 exerts oncogenic role and is negatively regulated by miR... 2017 · 93 cites
PODXL, negatively regulated by KLF4, promotes the EMT and metast... 2018 · 90 cites
KCNMA1 cooperating with PTK2 is a novel tumor suppressor in gast... 2017 · 89 cites
Prognostic Prediction Using a Stemness Index-Related Signature i... 2020 · 87 cites
Differentially expressed genes ASPN, COL1A1, FN1, VCAN and MUC5A... 2019 · 86 cites
N6-methyladenosine-dependent pri-miR-17-92 maturation suppresses... 2020 · 81 cites
The m6A Reader YTHDF1 Facilitates the Tumorigenesis and Metastas... 2021 · 81 cites
Histone methyltransferase SETD1A interacts with HIF1α to enhance... 2020 · 76 cites

62 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay

microarray-expr

Organism

Homo sapiens

Read type

not sequencing

Files available

CEL

Metrics (value · how obtained)

supplementary file types CEL reported

QC cost 2 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently