Corpus 1,275 assessed · 1,176 scored · 644 reproduced ≥75 · 170 flagged ·∅ 74.1/100
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GSE30656

GEO first seen 2015

Altered microRNA expression associated with chromosomal and epigenetic changes contributes to cervical carcinogenesis

Organism
Homo sapiens
Samples
47
Type
Non-coding RNA profiling by...
Submitted
2011-07-14

Little is known about the alterations in microRNA (miRNA) expression patterns during the consecutive stages of cervical cancer development and their association with chromosomal instability and epigenetic changes. We integrated miRNA expression profiles in normal cervical squamous epithelium, high-grade precancerous lesions (CIN2-3), squamous cell carcinomas (SCC) and adenocarcinomas (AdCAs) with previously generated chromosomal profiles of the same samples. In addition, the DNA methylation stat...

Provenance — who produced it, who reused it

Linked to 11 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Saskia M WiltingPeter J SnijdersWina VerlaatAnnelieke Bosman-JaspersMark A vandeWielWessel N vanWieringenGerrit A MeijerGemma G KenterYajun YiCarlos leSageReuven AgamiChris J MeijerRenske D Steenbergen
Reused by

9 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 23 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently