Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE30784

GEO first seen 2016

Gene expression profiling of oral squamous cell carcinoma (OSCC)

Organism
Homo sapiens
Samples
229
Type
Expression profiling by arra...
Submitted
2011-07-19

OSCC is associated with substantial mortality and morbidity. To identify potential biomarkers for the early detection of invasive OSCC, we compared the gene expressions of OSCC, oral dysplasia, and normal oral tissue from patients without oral cancer or preneoplastic oral lesions (controls). Results provided models of gene expression to distinguish OSCC from controls.

Provenance — who produced it, who reused it

Linked to 96 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Chu ChenEduardo MendezJohn HouckWenhong FanPawadee LohavanichbutrDavid DoodyBevan YuehNeal FutranMelissa UptonGregory FarwellStephen SchwartzLue P Zhao
Reused by

70 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
microarray-expr
Organism
Homo sapiens
Files available
CEL
Metrics (value · how obtained)
supplementary file types CEL reported
QC cost 1 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently

Scientific quality

Based on hands-on reproduction of the papers that use this dataset. A reproducible paper that stands on this data is positive evidence; a flagged one is a prompt to look closer — never a verdict on the dataset itself without the evidence.

1 studies use it 1 flagged mean score 10