Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE32676

GEO first seen 2015

Integrative Survival-Based Molecular Profiling of Human Pancreatic Cancer [mRNA]

Organism
Homo sapiens
Samples
32
Type
Expression profiling by arra...
Submitted
2011-10-06

To perform an integrative profile of human pancreatic cancer (PDAC) to identify prognosis-significant genes and their related pathways. A concordant survival-based whole genome in silico array analysis of DNA copy number, and mRNA & micro RNA (miRNA) expression in 25 early stage PDAC was performed. A novel composite score simultaneously integrated gene expression with regulatory mechanisms to identify the signature genes with the most levels of prognosis-significant evidence. The predominant sig...

Provenance — who produced it, who reused it

Linked to 47 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Timothy R DonahueLinh M TranReginald HillYunfeng LiAnne KovochichJoseph H CalvopinaSanjeet G PatelNanping WuAntreas HindoyanJames J FarrellXinmin LiDavid W DawsonHong Wu
Reused by

38 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
microarray-expr
Organism
Homo sapiens
Read type
not sequencing
Files available
CEL
Metrics (value · how obtained)
supplementary file types CEL reported
QC cost 2 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently