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Comprehensive identification of long non-coding RNAs expressed during zebrafish embryogenesis
This SuperSeries is composed of the SubSeries listed below.
Provenance — who produced it, who reused it
Linked to 7 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Andrea PauliEivind ValenMichael F LinManuel GarberNadine L VastenhouwJoshua Z LevinAlbin SandelinJohn L RinnAviv RegevAlexander F Schier
Reused by
- Long non-coding RNAs as a source of new peptides 2014 · 559 cites
- Ribosome profiling reveals resemblance between long non-coding R... 2013 · 290 cites
- Epigenetic conservation at gene regulatory elements revealed by... 2013 · 246 cites
- An improved zebrafish transcriptome annotation for sensitive and... 2020 · 169 cites
- Selective Roles of Vertebrate PCF11 in Premature and Full-Length... 2019 · 151 cites
2 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
ChIP-seq
Organism
Danio rerio
QC cost
9 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently