The grapevine expression atlas reveals a deep transcriptome shift driving the entire plant into a maturation program
The first genome-wide transcriptomic atlas of grapevine (Vitis vinifera) is based on 54 diverse samples expressing ~93% of predicted grapevine genes. Pollen and senescent leaves have unique transcriptomes but microarray analysis grouped all other samples into vegetative/green or mature/woody categories based on maturity rather than organ identity. This fundamental transcriptome reprograming during maturation was highlighted by three distinct statistical approaches supported by gene coexpression...
Provenance — who produced it, who reused it
Linked to 19 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- Genome and transcriptome analysis of the grapevine (Vitis vinife... 2014 · 215 cites
- A comprehensive survey of the grapevine VQ gene family and its t... 2015 · 94 cites
- Genome-wide identification and analysis of mitogen activated pro... 2014 · 86 cites
- Genome-wide identification and transcript analysis of TCP transc... 2019 · 85 cites
- The Cytochrome P450 Monooxygenase Inventory of Grapevine (Vitis... 2020 · 72 cites
- The Evolutionary History and Diverse Physiological Roles of the... 2013 · 71 cites
13 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently