Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE37250

GEO first seen 2015

Genome-wide transcriptional profiling of HIV positive and negative adults with active tuberculosis, latent TB infection and other diseases

Organism
Homo sapiens
Samples
537
Type
Expression profiling by arra...
Submitted
2012-04-13

The study aimed to define transcriptional signatures for detection of active TB (TB) compared to latent TB infection (LTBI) as well as to other diseases (OD) with similar clinical phenotypes in patients with and without HIV in two African adult populations. Transcriptional signatures were identified that distinguished active TB from LTBI, active TB from other diseases, and active TB from both LTBI and other diseases in HIV+/- patients.

Provenance — who produced it, who reused it

Linked to 19 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Suzanne T AndersonLachlan J CoinAmelia C CrampinHazel M DockrellBrian EleyNeil FrenchRobert S HeydermanMartin L HibberdMyrsini KaforouFlorian KernPaul R LangfordMichael LevinLing LingRobert J WilkinsonVictoria J Wright
Reused by

17 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
microarray-expr
Organism
Homo sapiens
Files available
TXT
Metrics (value · how obtained)
supplementary file types TXT reported

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently

Scientific quality

Based on hands-on reproduction of the papers that use this dataset. A reproducible paper that stands on this data is positive evidence; a flagged one is a prompt to look closer — never a verdict on the dataset itself without the evidence.

1 studies use it 1 reproduced mean score 100