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Affymetrix expression data from colon cancer patient tissues
Gene expression profiling of 111 colon tissues from tumors and adjacent noncancerous tissues. Genotypes for the rs5995355 in NCF4 are included to identify genes whose expression are associated with this genotype.
Provenance — who produced it, who reused it
Linked to 29 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Aaron J SchetterBrid M RyanCurtis C Harris
Reused by
- Mutant p53 cancers reprogram macrophages to tumor supporting mac... 2018 · 481 cites
- Network Pharmacology to Unveil the Biological Basis of Health-St... 2018 · 113 cites
27 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
microarray-expr
Organism
Homo sapiens
Read type
not sequencing
Files available
CEL
Metrics (value · how obtained)
supplementary file types
CEL
reported
QC cost
13 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently