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Provenance — who produced it, who reused it
Linked to 8 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Reused by
- Induction of APOBEC3 Exacerbates DNA Replication Stress and Chro... 2021 · 143 cites
- A comparison of per sample global scaling and per gene normaliza... 2017 · 98 cites
6 further papers cite this accession but reuse could not be confirmed.
Deep data QC
80/100 · BStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct
0.017
measured
pct q20 bases
93.9
measured
pct q30 bases
87.8
measured
gc content pct
32.9
measured
mean read length
36
measured
mean base quality
35.1
measured
adapter content pct
0.09
measured
duplication rate pct
70.54
measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 80/100
The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
87.8
measured
×1
89%
mean base quality
35.1
measured
×0.6
100%
adapter content pct
0.09
measured
×0.4
100%
duplication rate pct
70.54
measured
×0.4
10%
QC cost
37 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0