Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE50191

GEO first seen 2016

Maize proteome and transcriptome atlas

Organism
Zea mays
Samples
68
Type
Expression profiling by high...
Submitted
2013-08-26

An atlas of RNA and protein expression maps across a diverse set of developmental tissues from Zea mays

Provenance — who produced it, who reused it

Linked to 3 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Robert J SchmitzJustin R WalleySteven P BriggsJoseph R Ecker
Reused by

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
bulk-RNA-seq
Organism
Zea mays
Instrument
Illumina HiSeq 2500
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
68 / 68 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok yes reported
total bases 171142142100 reported
total reads 1711421421 reported
supplementary file types TSV reported
QC cost 7 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently