Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
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GSE51334

GEO first seen 2014

DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions

Organism
Homo sapiens; Mus musculus
Samples
993
Type
Other
Submitted
2013-10-02

Eukaryotic chromosomes replicate in a temporal order known as the replication-timing program. In mammals, replication timing is cell type-specific with at least half the genome switching replication timing during development, primarily in units of 400-800 kilobases ('replication domains;), whose positions are preserved in different cell types, conserved between species, and appear to confine long-range effects of chromosome rearrangements. Early and late replication correlate, respectively, with...

Provenance — who produced it, who reused it

Linked to 3 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Benjamin D PopeTyrone RybaVishnu DileepFeng YueWeisheng WuOlgert DenasRobert E ThurmanYong ChengGünhan GülsoyMichael SnyderJohn A StamatoyannopoulosJames TaylorRoss C HardisonTamer KahveciBing RenDavid M Gilbert
Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 20 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently