Corpus 1,280 assessed · 1,181 scored · 646 reproduced ≥75 · 170 flagged ·∅ 74/100
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GSE52314

GEO first seen 2014

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

Deep data QC

83/100 · B

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

Human 36 bp short-read RNA-seq with exceptional mean base quality of 53.2 (far exceeding typical phred scales) combined with Q30 of 98.1%, suggesting either highly selected or statistically unusual quality-scoring data. This quality anomaly warrants independent verification. Searchable with caution as human small-RNA or ultra-high-quality transcript reference.

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct 0.056 measured
pct q20 bases 100 measured
pct q30 bases 98.1 measured
gc content pct 46.7 measured
mean read length 36 measured
mean base quality 53.2 measured
adapter content pct 0 measured
duplication rate pct 78.71 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 83/100

The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 98.1 measured ×1 100%
mean base quality 53.2 measured ×0.6 100%
adapter content pct 0 measured ×0.4 100%
duplication rate pct 78.71 measured ×0.4 0%
QC cost 28 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0