Poly(A)-tail profiling reveals an embryonic switch in translational control
Poly(A) tails enhance the stability and translation of most eukaryotic messenger RNAs, but difficulties in globally measuring poly(A)-tail lengths have impeded greater understanding of poly(A)-tail function. Here we describe poly(A)-tail length profiling by sequencing (PAL-seq) and apply it to measure tail lengths of millions of individual RNAs isolated from yeasts, cell lines, Arabidopsis thaliana leaves, mouse liver, and zebrafish and frog embryos. Poly(A)-tail lengths were conserved between o...
Provenance — who produced it, who reused it
Linked to 10 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- Atlas of Subcellular RNA Localization Revealed by APEX-Seq 2019 · 663 cites
- mRNA Deadenylation Is Coupled to Translation Rates by the Differ... 2018 · 277 cites
- Ythdf m6A Readers Function Redundantly during Zebrafish Developm... 2020 · 106 cites
- PAT-seq: a method to study the integration of 3′-UTR dynamics wi... 2015 · 91 cites
- riboCIRC: a comprehensive database of translatable circRNAs 2021 · 82 cites
4 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently