← Dataset search
Provenance — who produced it, who reused it
Linked to 13 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Reused by
- Inference of RNA decay rate from transcriptional profiling highl... 2017 · 130 cites
- Discovery of autism/intellectual disability somatic mutations in... 2019 · 112 cites
11 further papers cite this accession but reuse could not be confirmed.
Deep data QC
78/100 · CStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct
0.003
measured
pct q20 bases
90
measured
pct q30 bases
80.1
measured
gc content pct
43.7
measured
mean read length
125
measured
mean base quality
33.8
measured
adapter content pct
2.5
measured
duplication rate pct
12.23
measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 78/100
The C grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
80.1
measured
×1
51%
mean base quality
33.8
measured
×0.6
97%
adapter content pct
2.5
measured
×0.4
97%
duplication rate pct
12.23
measured
×0.4
100%
QC cost
26 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0