Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE5764

GEO first seen 2013

Analysis of microdissected invasive lobular and ductal breast carcinomas in relation to normal ductal and lobular cells

Organism
Homo sapiens
Samples
30
Type
Expression profiling by arra...
Submitted
2006-09-05

The aim of our study was to identify gene expression profiles of ductal and lobular carcinomas in relation to normal ductal and lobular cells. We examined ten mastectomy specimens from postmenopausal breast cancer patients. Ductal and lobular tumor and normal cells were microdissected from cryosections. Fifty nanograms of total RNA were amplified and labeled by PCR and in vitro transcription. GCOS pairwise comparison algorithm and rank products have identified multiple genes that are differentia...

Provenance — who produced it, who reused it

Linked to 28 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Gulisa TurashviliJan BouchalKarl BaumforthWenbin WeiMarta DziechciarkovaJiri EhrmannJiri KleinEduard FridmanJozef SkardaMarian HajduchPaul MurrayZdenek Kolar
Reused by

21 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
microarray-expr
Organism
Homo sapiens
Read type
not sequencing
Files available
CEL, EXP
Metrics (value · how obtained)
supplementary file types CEL, EXP reported
QC cost 1 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently