Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
← Dataset search

GSE62129

GEO first seen 2015

HuR- dependent regulation of mRNA splicing is essential for the B cell antibody response [RNA-Seq]

Organism
Mus musculus
Samples
15
Type
Expression profiling by high...
Submitted
2014-10-07

Post-transcriptional regulation of mRNA by the RNA binding protein HuR is required in B cells for the germinal centre reaction and for the production of class-switched antibodies in response to T-independent antigens. Transcriptome-wide examination of RNA isoforms, abundance and translation in HuR-deficient B cells, together with direct measurements of HuR-RNA interaction, revealed that HuR-dependent mRNA splicing affects hundreds of transcripts including the dihydrolipoyl succinyltransferase (...

Provenance — who produced it, who reused it

Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Manuel D Diaz-MuñozSarah E BellKirsten FairfaxElisa Monzon-CasanovaAdam F CunninghamMar Gonzalez-PortaSimon R AndrewsVictoria I BunikKathi ZarnackTomaz CurkDimitris L KontoyiannisJernej UleMartin Turner
Reused by

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 22 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently