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Provenance — who produced it, who reused it
Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Reused by
- Secondary Structure across the Bacterial Transcriptome Reveals V... 2015 · 194 cites
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
83/100 · BStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
bulk-RNA-seq
Organism
Escherichia coli
Metrics (value · how obtained)
n content pct
0.021
measured
pct q20 bases
96.4
measured
pct q30 bases
88.8
measured
gc content pct
52.4
measured
mean read length
36
measured
mean base quality
35.7
measured
adapter content pct
0
measured
duplication rate pct
69.58
measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 83/100
The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
88.8
measured
×1
94%
mean base quality
35.7
measured
×0.6
100%
adapter content pct
0
measured
×0.4
100%
duplication rate pct
69.58
measured
×0.4
12%
QC cost
26 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0