Expression data from head and neck squamous cell carcinoma
Forty-four paired (from the same patient) samples of head and neck squamous cell carcinoma (HNSCC) and normal tissue were studied with Affymetrix U95A chips. A stringent multi-test approach, combining 7 traditional and microarray-specific statistical tests, was used to analyze the resultant data. Candidate genes were assigned to tiers of significance based on the number of statistical tests that each gene satisfied. Representative genes (both up-regulated and down-regulated) from each of the 3 t...
Provenance — who produced it, who reused it
Linked to 34 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- Identification of Hub Genes Associated With Development of Head... 2020 · 105 cites
- Lin28b Promotes Head and Neck Cancer Progression via Modulation... 2012 · 84 cites
- Single Sample Expression-Anchored Mechanisms Predict Survival in... 2012 · 83 cites
- CrossNorm: a novel normalization strategy for microarray data in... 2016 · 76 cites
30 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently