Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE67015

GEO first seen 2016

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

Deep data QC

96/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

Mouse bulk RNA-seq with 50 bp reads achieves excellent quality metrics (96.5% Q30, 98.6% Q20) and zero adapter contamination, enabling robust gene-level and isoform-level expression quantification. The high fidelity of sequencing supports sensitive detection of differentially expressed genes and is ideal for reuse in comparative transcriptomics and functional genomics studies.

Data type / assay
bulk-RNA-seq
Organism
Mus musculus
Metrics (value · how obtained)
n content pct 0.007 measured
pct q20 bases 98.6 measured
pct q30 bases 96.5 measured
gc content pct 45 measured
mean read length 50 measured
mean base quality 38.1 measured
adapter content pct 0 measured
duplication rate pct 40.73 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 96/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 96.5 measured ×1 100%
mean base quality 38.1 measured ×0.6 100%
adapter content pct 0 measured ×0.4 100%
duplication rate pct 40.73 measured ×0.4 76%
QC cost 29 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0