← Dataset search
Leucegene: AML sequencing (part 5)
RNA sequencing of human leukemia
Provenance — who produced it, who reused it
Linked to 10 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Vincent LavalléeJana KroslBrian WilhelmFrédéric BarabéPatrick GendronGeneviève BoucherRaphaëlle LambertClaude RondeauAnnie BilodeauSylvie LavalléeCaroline PabstJonathan YehBernhard LehnertzRadia JohnsonClarisse ThiollierGiovanni D'AngeloSébastien LemieuxJosée HébertGuy Sauvageau
Reused by
- Mutations in the RNA Splicing Factor SF3B1 Promote Tumorigenesis... 2020 · 122 cites
- The lncRNA LAMP5-AS1 drives leukemia cell stemness by directly m... 2020 · 90 cites
8 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Instrument
Illumina HiSeq 2000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
525 / 263 runs
Completeness
100%
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
5262433468600.001
reported
total reads
26312167343
reported
supplementary file types
TXT
reported
QC cost
16 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently