← Dataset search
NeuroD2 ChIP-SEQ from embryonic cortex
NeuroD2 targets were identified from embryonic day 14.5 cerebral cortex tissue.
Provenance — who produced it, who reused it
Linked to 6 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Gulayse Ince Dunn
Reused by
- Multiscale 3D Genome Rewiring during Mouse Neural Development 2017 · 1,474 cites
- Multimodal profiling of the transcriptional regulatory landscape... 2022 · 79 cites
4 further papers cite this accession but reuse could not be confirmed.
Deep data QC
insufficient data to scoreStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
ChIP-seq
Organism
Mus musculus
Metrics (value · how obtained)
n content pct
0.001
measured
pct q20 bases
99
measured
pct q30 bases
96.9
measured
gc content pct
50
measured
mean read length
51
measured
mean base quality
38
measured
adapter content pct
1.44
measured
duplication rate pct
20.68
measured
How this grade was computed
The insufficient grade is a transparent weighted average. Each metric below scored from 0–100% against the published ChIP-seq thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
96.9
measured
×1
100%
QC cost
30 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0