Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE73060

GEO first seen 2018

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

Deep data QC

85/100 · B

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

Human bulk RNA-seq with longer 137.6 bp reads but moderate quality (84.5% Q30, 92.4% Q20) and modest adapter content (0.29%) balances isoform resolution against base accuracy. The extended read length improves mapping to complex loci; the dataset supports transcript isoform quantification with appropriate quality filtering for sensitive expression analysis.

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct 0.04 measured
pct q20 bases 92.4 measured
pct q30 bases 84.5 measured
gc content pct 45.6 measured
mean read length 137.6 measured
mean base quality 33.6 measured
adapter content pct 0.29 measured
duplication rate pct 34.65 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 85/100

The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 84.5 measured ×1 73%
mean base quality 33.6 measured ×0.6 93%
adapter content pct 0.29 measured ×0.4 100%
duplication rate pct 34.65 measured ×0.4 90%
QC cost 24 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0