Human body index - transcriptional profiling
Normal and diseased human tissues were profiled for gene expression using the Affymetrix U133 plus 2.0 array In total 677 samples were processed , representing over 90 distinct tissue types Some tissue samples were purchased from Stratagene (SG), Ambion (AB), and Becton-Dickinson (BD)
Provenance — who produced it, who reused it
Linked to 83 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- Estimating the population abundance of tissue-infiltrating immun... 2016 · 3,980 cites
- Reconstruction of Genome-Scale Active Metabolic Networks for 69... 2012 · 460 cites
- Reconstruction of genome-scale metabolic models for 126 human ti... 2012 · 293 cites
- Integrated interactions database: tissue-specific view of the hu... 2015 · 268 cites
- IID 2018 update: context-specific physical protein–protein inter... 2018 · 203 cites
- Chronic acidosis in the tumour microenvironment selects for over... 2015 · 180 cites
- A novel pathogenic role of the ER chaperone GRP78/BiP in rheumat... 2012 · 159 cites
- Recurrent ESR1–CCDC170 rearrangements in an aggressive subset of... 2014 · 152 cites
- Protein interaction network of alternatively spliced isoforms fr... 2014 · 150 cites
- MERAV: a tool for comparing gene expression across human tissues... 2015 · 135 cites
- Principal components analysis and the reported low intrinsic dim... 2016 · 116 cites
- Exploring the Transcriptome of Ciliated Cells Using In Silico Di... 2012 · 87 cites
- A distinct p53 target gene set predicts for response to the sele... 2015 · 87 cites
- Weighted Frequent Gene Co-expression Network Mining to Identify... 2012 · 86 cites
- Exploring diagnostic m6A regulators in endometriosis 2020 · 85 cites
- RefEx, a reference gene expression dataset as a web tool for the... 2017 · 73 cites
- MYCN-driven fatty acid uptake is a metabolic vulnerability in ne... 2022 · 73 cites
- Epithelial tumor suppressor ELF3 is a lineage-specific amplified... 2019 · 71 cites
62 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently