Corpus 1,280 assessed · 1,181 scored · 646 reproduced ≥75 · 170 flagged ·∅ 74/100
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GSE74162

GEO first seen 2015

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

Deep data QC

83/100 · B

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

Human bulk RNA-seq with 51 bp reads shows good quality (94.3% Q30, 97.6% Q20) and elevated GC content (57.4%), possibly reflecting a biased library or amplification artifact. Despite the compositional skew, base accuracy is strong enough for reliable expression profiling and differential expression analysis in human tissues.

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct 0.001 measured
pct q20 bases 97.6 measured
pct q30 bases 94.3 measured
gc content pct 57.4 measured
mean read length 51 measured
mean base quality 36.6 measured
adapter content pct 0 measured
duplication rate pct 96.35 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 83/100

The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 94.3 measured ×1 100%
mean base quality 36.6 measured ×0.6 100%
adapter content pct 0 measured ×0.4 100%
duplication rate pct 96.35 measured ×0.4 0%
QC cost 26 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0