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Provenance — who produced it, who reused it
Linked to 5 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Reused by
- H3.3K4M destabilizes enhancer H3K4 methyltransferases MLL3/MLL4... 2018 · 157 cites
4 further papers cite this accession but reuse could not be confirmed.
Deep data QC
78/100 · CStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
bulk-RNA-seq
Organism
Mus musculus
Metrics (value · how obtained)
n content pct
0.038
measured
pct q20 bases
93.2
measured
pct q30 bases
87.6
measured
gc content pct
49
measured
mean read length
76
measured
mean base quality
34.9
measured
adapter content pct
30.16
measured
duplication rate pct
8.33
measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 78/100
The C grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
87.6
measured
×1
88%
mean base quality
34.9
measured
×0.6
100%
adapter content pct
30.16
measured
×0.4
0%
duplication rate pct
8.33
measured
×0.4
100%
QC cost
25 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0