Corpus 1,273 assessed · 1,174 scored · 643 reproduced ≥75 · 169 flagged ·∅ 74.1/100
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GSE74850

GEO first seen 2015

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

Deep data QC

100/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

Human bulk RNA-seq with 101 bp reads and excellent quality (95.3% Q30, 98.2% Q20) provides optimal conditions for isoform-level quantification and splice variant detection. The combination of extended read length and high base accuracy supports comprehensive transcript characterization and is ideal for reuse in complex expression studies and alternative splicing analysis.

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct 0.005 measured
pct q20 bases 98.2 measured
pct q30 bases 95.3 measured
gc content pct 50.1 measured
mean read length 101 measured
mean base quality 36.7 measured
adapter content pct 0.35 measured
duplication rate pct 15.83 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 100/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 95.3 measured ×1 100%
mean base quality 36.7 measured ×0.6 100%
adapter content pct 0.35 measured ×0.4 100%
duplication rate pct 15.83 measured ×0.4 100%
QC cost 25 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0