Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE7553

GEO first seen 2013

Gene Expression Patterns Involved in the Malignant Transformation and Progression of Metastatic Melanoma

Organism
Homo sapiens
Samples
87
Type
Expression profiling by arra...
Submitted
2007-04-19

Metastatic melanoma is a deadly disease while non-metastatic melanoma and other cutaneous tumor types are usually cured with surgical removal of the primary tumors. This study evaluated gene expresion to determine if gene expression differences existed which would allow one to identify the metastatic tumors based on the expression of specific genes.

Provenance — who produced it, who reused it

Linked to 60 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Adam I RikerSteven A EnkemannSuHu LiuSuping RenJon BriggsYaguang XiPaul HowellSteven EschrichAdil DaudJane MessinaMatthew D'AlessioVernon K SondakRichard JoveRalf BeuttnerRajeev S SamantLalita A ShevdeJingfang JuOystein FodstadJaime Matta
Reused by

44 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
microarray-expr
Organism
Homo sapiens
Read type
not sequencing
Files available
CEL, CHP
Metrics (value · how obtained)
supplementary file types CEL, CHP reported
QC cost 4 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently