Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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GSE76068

GEO first seen 2021

Gene expression changes during development of sunitinib resistance in renal cell carcinoma patient derived xenografts

Organism
Homo sapiens; Mus musculus
Samples
40
Type
Expression profiling by arra...
Submitted
2015-12-16

Transcriptome analysis was used to identify gene expression changes during development of sunitinib resistance in a renal cell carcinoma patient-derived xenograft (PDX) model. During the response phase, tumors exhibited a 91% reduction in volume, characterized by induction of TNFRSF1A, TNFAIP3, NFKB2, CCL2, CCL20, BIRC3, and MOAP1. Ingenuity Pathway Analysis indicated decreased expression of cell survival genes during tumor response to sunitinib. In this model, after 4 weeks of treatment, tumo...

Provenance — who produced it, who reused it

Linked to 5 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
C M Diaz-MonteroFrances J MaoJohn BarnardYvonne ParkerMaryam Zamanian-DaryoushJohn J PinkJames H FinkeBrian I RiniDaniel J Lindner
Reused by

3 further papers cite this accession but reuse could not be confirmed.

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

Data type / assay
microarray-expr
Organism
Homo sapiens; Mus musculus
Read type
not sequencing
Files available
IDAT, TXT
Metrics (value · how obtained)
supplementary file types IDAT, TXT reported
QC cost 13 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently