Microarray expression data for tumor and adjacent non-tumor tissues from hepatocellular carcinoma patients
Here we aimed to develop a new molecular prognostic stratification system for hepatocellular carcinoma (HCC) patients after liver resection based on common prognostic factors for primary tumors (PTs) and adjacent non-tumor tissues (ANTTs). We studied global mRNA expression profiles from 115 PT tissue samples and 52 ANTT samples derived from 115 HCC patients. Methods for the study included gene expression analysis, Functional Annotation/Gene Ontology analysis and unsupervised survival prognosis a...
Provenance — who produced it, who reused it
Linked to 187 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- HCCDB: A Database of Hepatocellular Carcinoma Expression Atlas 2018 · 305 cites
- METTL5 stabilizes c‐Myc by facilitating USP5 translation to repr... 2023 · 208 cites
- Microenvironment characterization and multi-omics signatures rel... 2020 · 195 cites
- Downregulation of exosomal CLEC3B in hepatocellular carcinoma pr... 2019 · 138 cites
- System analysis based on the cuproptosis-related genes identifie... 2022 · 137 cites
- Construction and comprehensive analysis of a ceRNA network to re... 2019 · 123 cites
- Identification of Energy Metabolism Genes for the Prediction of... 2020 · 116 cites
- M2-like tumor-associated macrophage-related biomarkers to constr... 2022 · 111 cites
- Large-scale analysis reveals a novel risk score to predict overa... 2018 · 104 cites
- Identification of Prognostic Genes in the Tumor Microenvironment... 2021 · 99 cites
- MiR-126 negatively regulates PLK-4 to impact the development of... 2018 · 86 cites
- DNA topoisomerase 1 and 2A function as oncogenes in liver cancer... 2018 · 83 cites
- The competitive endogenous RNA regulatory network reveals potent... 2019 · 78 cites
- An Integrated Model Based on a Six-Gene Signature Predicts Overa... 2020 · 73 cites
- Identification and validation of a prognostic four-genes signatu... 2019 · 71 cites
- APEX1 is a novel diagnostic and prognostic biomarker for hepatoc... 2020 · 71 cites
63 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently
Scientific quality
Based on hands-on reproduction of the papers that use this dataset. A reproducible paper that stands on this data is positive evidence; a flagged one is a prompt to look closer — never a verdict on the dataset itself without the evidence.