Corpus 1,283 assessed · 1,184 scored · 647 reproduced ≥75 · 173 flagged ·∅ 73.9/100
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GSE79622

GEO first seen 2017

Ubiquitination of Stalled Ribosome Triggers Ribosome-associated Quality Control [SET1]

Organism
Saccharomyces cerevisiae
Samples
12
Type
Other
Submitted
2016-03-25

Translation elongation rates are regulated to ensure proper conformation and biological function of proteins. Translation of either non-stop mRNA or transcripts coding for poly-basic sequences induces ribosome stalling, and the arrest product is degraded by the ribosome-mediated quality control system (RQC). During this process, the stalled ribosome is dissociated into subunits, and the polypeptide is ubiquitinated by the E3 ubiquitin ligase Listerin on the 60S large ribosomal subunit (LSU) lead...

Provenance — who produced it, who reused it

Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Deposited / produced by
Yoshitaka MatsuoKen IkeuchiYasushi SaekiShintaro IwasakiChristian SchmidtTsuyoshi UdagawaFumiya SatoHikaru TsuchiyaKoji AndoThomas BeckerKeiji TanakaNicholas T IngoliaRoland BeckmannToshifumi Inada
Reused by

Deep data QC

metadata only · no data-level QC for this type

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained

No quantitative QC rubric exists for this data type yet, so it is deliberately left unscored — this is an honest "not applicable", not a poor rating.

QC cost 22 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently