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Provenance — who produced it, who reused it
Linked to 3 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Reused by
- A TGFβ-PRMT5-MEP50 axis regulates cancer cell invasion through h... 2016 · 182 cites
2 further papers cite this accession but reuse could not be confirmed.
Deep data QC
57/100 · FStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Metrics (value · how obtained)
n content pct
0.078
measured
pct q20 bases
85.3
measured
pct q30 bases
78.5
measured
gc content pct
51.9
measured
mean read length
150
measured
mean base quality
33.1
measured
adapter content pct
18.4
measured
duplication rate pct
21.49
measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 57/100
The F grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
78.5
measured
×1
43%
mean base quality
33.1
measured
×0.6
85%
adapter content pct
18.4
measured
×0.4
9%
duplication rate pct
21.49
measured
×0.4
100%
QC cost
25 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0