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MicroRNA targeting specificity in mammals: determinants beyond seed pairing
This series consists of samples taken from HeLa transfected with miRNA duplexes.
Provenance — who produced it, who reused it
Linked to 8 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Deposited / produced by
Andrew GrimsonKyle K FarhWendy K JohnstonPhilip Garrett-EngeleLee P LimDavid P Bartel
Reused by
- miRmap: Comprehensive prediction of microRNA target repression s... 2012 · 399 cites
- Analysis of CDS-located miRNA target sites suggests that they ca... 2013 · 343 cites
- miRAW: A deep learning-based approach to predict microRNA target... 2018 · 119 cites
- Functional microRNAs and target sites are created by lineage-spe... 2013 · 77 cites
4 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
Data type / assay
microarray-expr
Organism
Homo sapiens
Read type
not sequencing
QC cost
9 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently