A single-cell survey of the small intestinal epithelium
To understand the diversity of cellular states within mouse intestinal epithelial tissue, we obtained whole intestines from wild type mice, dissagregated the samples, sorted into single cells and profiled them by single-cell RNA-seq.
Provenance — who produced it, who reused it
Linked to 32 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
- Confronting false discoveries in single-cell differential expres... 2021 · 980 cites
- Intrinsic Dynamics of a Human Gene Reveal the Basis of Expressio... 2018 · 295 cites
- Cell type prioritization in single-cell data 2020 · 268 cites
- Scalable analysis of cell-type composition from single-cell tran... 2019 · 185 cites
- Revealing dynamics of gene expression variability in cell state... 2019 · 101 cites
- Butyrophilin-like proteins display combinatorial diversity in se... 2020 · 82 cites
- A dietary change to a high-fat diet initiates a rapid adaptation... 2022 · 79 cites
24 further papers cite this accession but reuse could not be confirmed.
Deep data QC
metadata only · no data-level QC for this typeStandardized, field-standard QC computed by touching the data — every metric states how it was obtained
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0 · provisional — verify independently
Scientific quality
Based on hands-on reproduction of the papers that use this dataset. A reproducible paper that stands on this data is positive evidence; a flagged one is a prompt to look closer — never a verdict on the dataset itself without the evidence.