Corpus 1,284 assessed · 1,185 scored · 647 reproduced ≥75 · 173 flagged ·∅ 73.9/100
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GSE98744

GEO first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

Deep data QC

96/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

Heterocephalus glaber (naked mole-rat) bulk RNA-seq with measured quality metrics showing 98.7% Q20 and 96% Q30 bases on 51 bp reads, despite unavailable fetch data preventing full experimental details. The consistent base quality and low N-content (0.004%) suggest high-fidelity short-read RNA sequencing suitable for studying eusocial mammal transcriptomics. Consider that the missing metadata limits verification of library preparation method and potential batch effects in downstream analyses.

Data type / assay
bulk-RNA-seq
Organism
Heterocephalus glaber
Metrics (value · how obtained)
n content pct 0.004 measured
pct q20 bases 98.7 measured
pct q30 bases 96 measured
gc content pct 49.5 measured
mean read length 51 measured
mean base quality 37.7 measured
adapter content pct 0.02 measured
duplication rate pct 39.49 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 96/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 96 measured ×1 100%
mean base quality 37.7 measured ×0.6 100%
adapter content pct 0.02 measured ×0.4 100%
duplication rate pct 39.49 measured ×0.4 79%
QC cost 26 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0