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Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Reused by
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
100/100 · AStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
amplicon
Organism
human reproductive system metagenome
Instrument
BGISEQ-500
Platform
BGISEQ
Read type
short-read
Files available
FASTQ (raw reads), BAM/CRAM (aligned)
N numbers (samples, groups)
159 runs
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
26735022105
reported
total reads
275193255
reported
n content pct
0
measured
pct q20 bases
98.8
measured
pct q30 bases
95
measured
gc content pct
42.8
measured
mean read length
94.3
measured
mean base quality
37.2
measured
adapter content pct
0.06
measured
duplication rate pct
2.84
measured
How this grade was computed
Weighted mean of 2 scored metric(s) → 100/100
The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published amplicon thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
95
measured
×1
100%
adapter content pct
0.06
measured
×0.5
100%
QC cost
2 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0