PRJNA1074715

BioProject

Provenance — who produced it, who reused it

Linked to 0 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

No linked papers found in the corpus yet.

Deep data QC

100/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means

claude:haiku

High-quality WGS of the cyanobacterium Dolichospermum lemmermannii FEM_B0920 using NovaSeq 6000 produced 63 million 150 bp reads with perfect 100% Q20/Q30 basecalls and 51.9% GC. The exceptional base quality and straightforward genomic composition indicate minimal sequencing artifacts, making this dataset well-suited for comprehensive microbial genome analysis or metagenomic comparisons.

Data type / assay

WGS

Organism

Dolichospermum lemmermannii FEM_B0920

Instrument

Illumina NovaSeq 6000

Platform

ILLUMINA

Read type

short-read

Files available

FASTQ (raw reads)

N numbers (samples, groups)

1 runs

Metrics (value · how obtained)

checksum ok yes reported

total bases 18890193000 reported

total reads 62967310 reported

n content pct 1.378 measured

pct q20 bases 100 measured

pct q30 bases 100 measured

gc content pct 51.9 measured

mean read length 150 measured

mean base quality 30 measured

adapter content pct 0.02 measured

duplication rate pct 4.13 measured

How this grade was computed

Weighted mean of 3 scored metric(s) → 100/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 100 measured ×1 100%

duplication rate pct 4.13 measured ×0.5 100%

adapter content pct 0.02 measured ×0.4 100%

QC cost 19 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0