PRJNA1201107

BioProject

Provenance — who produced it, who reused it

Linked to 0 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

No linked papers found in the corpus yet.

Deep data QC

89/100 · B

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

Data type / assay

amplicon

Organism

gut metagenome

Instrument

Illumina NovaSeq 6000

Platform

ILLUMINA

N numbers (samples, groups)

144 runs

Metrics (value · how obtained)

checksum ok yes reported

total bases 7314192442 reported

total reads 14819435 reported

n content pct 0 measured

pct q20 bases 100 measured

pct q30 bases 100 measured

gc content pct 54.9 measured

mean read length 242 measured

mean base quality 30 measured

adapter content pct 5.48 measured

duplication rate pct 95.07 measured

How this grade was computed

Weighted mean of 2 scored metric(s) → 89/100

The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published amplicon thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 100 measured ×1 100%

adapter content pct 5.48 measured ×0.5 68%

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0