Corpus 1,273 assessed · 1,174 scored · 643 reproduced ≥75 · 169 flagged ·∅ 74.1/100
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PRJNA1327367

BioProject

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

100/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

Long-read PacBio Revio WGS with organism unspecified produced only 60.6k reads but accumulated 843.1 Mb bases at exceptional 14007.2 bp mean length. The 98.1% Q20 and 95.6% Q30 reflect PacBio Sequel II accuracy; ultra-long reads enable complete genome assembly, gap closure, and repetitive-region recovery without organism-specific depth predictions.

Data type / assay
WGS
Instrument
Revio
Platform
PACBIO_SMRT
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 843125788 reported
total reads 60609 reported
n content pct 0 measured
pct q20 bases 98.1 measured
pct q30 bases 95.6 measured
gc content pct 28.3 measured
mean read length 14007.2 measured
mean base quality 38.9 measured
adapter content pct 0 measured
duplication rate pct 2.39 measured
How this grade was computed
Weighted mean of 3 scored metric(s) → 100/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 95.6 measured ×1 100%
duplication rate pct 2.39 measured ×0.5 100%
adapter content pct 0 measured ×0.4 100%

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0

Scientific quality

Based on hands-on reproduction of the papers that use this dataset. A reproducible paper that stands on this data is positive evidence; a flagged one is a prompt to look closer — never a verdict on the dataset itself without the evidence.

1 studies use it 1 reproduced mean score 95