PRJNA355640
BioProjectProvenance — who produced it, who reused it
Linked to 0 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
No linked papers found in the corpus yet.
Deep data QC
47/100 · FStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Whole-genome sequencing (Alteromonas macleodii, PacBio RS II) with failed F-grade score (47/100). Unusable base quality (mean 7.1, Q30 0%, Q20 0%, scoring 0/100) from older PacBio platform indicates raw sequencing failure. Not suitable for assembly or variant calling; resequencing with modern long-read technology is mandatory.
The F grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0
Scientific quality
Based on hands-on reproduction of the papers that use this dataset. A reproducible paper that stands on this data is positive evidence; a flagged one is a prompt to look closer — never a verdict on the dataset itself without the evidence.
- Benefit from decline: the primary transcriptome of Alteromon...⚑ L1 No data access ⚑