Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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PRJNA373913

BioProject first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

73/100 · C

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

This hybrid-read WGS dataset of Arthrobacter sp. KBS0703 on an Illumina HiSeq 2000 contains 951,000 reads with 87.7% Q30 quality and exceptionally high 63% GC content, characteristic of actinobacterial genomes from soil environments. Researchers studying soil bacteria, antibiotic biosynthesis pathways, or high-GC bacterial genomics will benefit from hybrid sequencing enabling assembly of repetitive and GC-rich genomic regions. The dataset demonstrates successful sequencing of environmental isolates with challenging genome composition.

Data type / assay
WGS
Organism
Arthrobacter sp. KBS0703
Instrument
Illumina HiSeq 2000
Platform
ILLUMINA
Read type
hybrid (short+long)
Files available
FASTQ (raw reads)
N numbers (samples, groups)
2 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 757971928 reported
total reads 951217 reported
n content pct 0.001 measured
pct q20 bases 92 measured
pct q30 bases 87.7 measured
gc content pct 63 measured
mean read length 150 measured
mean base quality 33.2 measured
adapter content pct 26.24 measured
duplication rate pct 4.33 measured
How this grade was computed
Weighted mean of 3 scored metric(s) → 73/100

The C grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 87.7 measured ×1 89%
duplication rate pct 4.33 measured ×0.5 100%
adapter content pct 26.24 measured ×0.4 0%
QC cost 34 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0