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Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Reused by
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
62/100 · DStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
WGS
Organism
sponge metagenome
Instrument
Illumina MiSeq
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
13 runs
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
16284700796
reported
total reads
27050998
reported
n content pct
0.039
measured
pct q20 bases
92.8
measured
pct q30 bases
84.5
measured
gc content pct
46.9
measured
mean read length
301
measured
mean base quality
34.2
measured
adapter content pct
10.95
measured
duplication rate pct
18.29
measured
How this grade was computed
Weighted mean of 3 scored metric(s) → 62/100
The D grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
84.5
measured
×1
73%
duplication rate pct
18.29
measured
×0.5
68%
adapter content pct
10.95
measured
×0.4
29%
QC cost
19 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0