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Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Reused by
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
90/100 · AStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
WES
Organism
Homo sapiens
Instrument
BGISEQ-500
Platform
BGISEQ
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
23 runs
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
363058694324
reported
total reads
1777795654
reported
n content pct
0.005
measured
pct q20 bases
96.4
measured
pct q30 bases
90.1
measured
gc content pct
51
measured
mean read length
151
measured
mean base quality
37.7
measured
adapter content pct
12.35
measured
duplication rate pct
4.28
measured
mean target coverage
5855.8
extrapolated
How this grade was computed
Weighted mean of 4 scored metric(s) → 90/100
The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published WES thresholds, weighted by its importance; nothing is hidden or subjective.
mean target coverage
5855.8
extrapolated
×1.2
100%
pct q30 bases
90.1
measured
×1
100%
duplication rate pct
4.28
measured
×0.5
100%
adapter content pct
12.35
measured
×0.4
19%
QC cost
22 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0