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Provenance — who produced it, who reused it
Linked to 2 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
Reused by
2 further papers cite this accession but reuse could not be confirmed.
Deep data QC
96/100 · AStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
WGS
Organism
Canis latrans
Instrument
HiSeq X Ten
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1,736 runs
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
95869851852450
reported
total reads
321681876667
reported
n content pct
0.006
measured
pct q20 bases
97.3
measured
pct q30 bases
93.5
measured
gc content pct
41.6
measured
mean read length
150
measured
mean base quality
38.7
measured
adapter content pct
0
measured
duplication rate pct
13.22
measured
How this grade was computed
Weighted mean of 3 scored metric(s) → 96/100
The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.
pct q30 bases
93.5
measured
×1
100%
duplication rate pct
13.22
measured
×0.5
84%
adapter content pct
0
measured
×0.4
100%
QC cost
1.8 min compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0