PRJNA765612

BioProject

Provenance — who produced it, who reused it

Linked to 0 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

No linked papers found in the corpus yet.

Deep data QC

44/100 · F

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

Data type / assay

WGS

Organism

wastewater metagenome

Instrument

Illumina MiSeq

Platform

ILLUMINA

N numbers (samples, groups)

433 runs

Metrics (value · how obtained)

checksum ok yes reported

total bases 276032723272 reported

total reads 1157332847 reported

n content pct 0.629 measured

pct q20 bases 82.4 measured

pct q30 bases 79.8 measured

gc content pct 52.9 measured

mean read length 74 measured

mean base quality 32.2 measured

adapter content pct 2.9 measured

duplication rate pct 58.15 measured

How this grade was computed

Weighted mean of 3 scored metric(s) → 44/100

The F grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 79.8 measured ×1 49%

duplication rate pct 58.15 measured ×0.5 0%

adapter content pct 2.9 measured ×0.4 86%

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0