Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
61/100 · DStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Homo sapiens EST (35bp short-read) with marginal base quality (Grade D, 61/100). Q30 at 78.3% and mean quality of 30.6 are limiting factors that reduce sensitivity for low-abundance transcripts; paired with inherently short reads, power for variant calling and expression quantification is diminished. Conditional use only.
The D grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0