SRR10012090

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

93/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means

claude:haiku

High-quality bulk RNA-seq of the green lacewing Chrysoperla carnea on a NextSeq 500, generating 4.9 billion bases at 94% Q30. This represents substantial coverage for insect transcriptomics and can support isoform discovery, temporal expression dynamics, and comparative analysis with other arthropod species.

Data type / assay

bulk-RNA-seq

Organism

Chrysoperla carnea

Instrument

NextSeq 500

Platform

ILLUMINA

Read type

short-read

Files available

FASTQ (raw reads)

N numbers (samples, groups)

1 runs

Metrics (value · how obtained)

checksum ok yes reported

total bases 4907487097 reported

total reads 32492000 reported

n content pct 0.012 measured

pct q20 bases 95.9 measured

pct q30 bases 93.7 measured

gc content pct 38.8 measured

mean read length 75.5 measured

mean base quality 34.3 measured

adapter content pct 0 measured

duplication rate pct 50 measured

How this grade was computed

Weighted mean of 4 scored metric(s) → 93/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 93.7 measured ×1 100%

mean base quality 34.3 measured ×0.6 100%

adapter content pct 0 measured ×0.4 100%

duplication rate pct 50 measured ×0.4 56%

QC cost 25 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0