Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
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SRR10035827

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

99/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

Bombyx mori RNA-seq from an Illumina NovaSeq 6000 with 24 million short reads at 94% Q30, totaling 7.2 billion bases. This high-quality dataset supports robust differential expression analysis and transcript quantification across developmental or treatment conditions.

Data type / assay
bulk-RNA-seq
Organism
Bombyx mori
Instrument
Illumina NovaSeq 6000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 7206350100 reported
total reads 24021167 reported
n content pct 0 measured
pct q20 bases 97.7 measured
pct q30 bases 93.6 measured
gc content pct 40.3 measured
mean read length 150 measured
mean base quality 35.9 measured
adapter content pct 0.01 measured
duplication rate pct 32.53 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 99/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 93.6 measured ×1 100%
mean base quality 35.9 measured ×0.6 100%
adapter content pct 0.01 measured ×0.4 100%
duplication rate pct 32.53 measured ×0.4 94%
QC cost 18 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0